Do you Try interactive molecular dynamics (IMD)? Certainly, you have a fun.
Free Download
OS:Win,Linux
but,Copyrights all resereved memm lab. kansai univ.
#We are not responsible for any inconvenience on your computer system due to this program !!!
What does begin by pressing "s" key?
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Software(Code), Links required for research activity
(K.Saitoh, updated at 2020/6/2)
 Book reading (English) circle: To here!
Electronic document etc.(permission is required.)
- Basic concepts and programming techniques ofmolecular dynamics method(in Japanese) [PDF]
- Introductory Molecular Dynbamics (in Japanese) [PDF] [ppt presen(PDF)][sample programs][sample programs(fortran)]
- Linux in Laboratory (in Japanese) [PDF] 2015 Version
- Let's be with LINUX(in Japanese) [PDF]
- Elementary foundation of computational mechanics [PDF(in prepartion)]
- PovRay(Computer graphics software） teaching[PDF]
- Manual of atomic force microscopy(AFM) [PDF(in preparation)]
- Installing intel fortran, math library, structural analysis software, graph drawing software[PDF(in preparation)]
- Installing ab initio software [PDF(in preparation)]
- Various report/memorandam of Dr.K.Saitoh [lists]
- Example utilization of MicroAVS in research field of ＭＤ (in Japanese) [WWW]
- Seminar on MicroAVS in educational use [lecture video]
- Nano-memm computation system: Abstract [PDF]
- Server configuration (plan) of Nano-group [PDF]
- Implementation of OpenMP and Parallelization [PDF]
- Normalized equation for MD calculation [PDF]
- 3-dimensional(3-D) graph by Gnuplot [PDF]
- Flow of study on Computational Mechanics(in Japanese)[PDF] 2014New
- Concerning Nano-group server (calculation flow)[PDF] 2019up
- Introduction of Lammps[PDF] 2019New
[Sample data] 2020New
Code of computation software (permission is required.）
- MD code using LJ potential [Al]
- MD code using EAM potential [FS | FS(Fe) | Mishin et al. | alloy | (Al)Mishin+shear]
- MD code using EMT potential [Cu]
- SPH code for solid [elastic] [plastic][elastic-plastic(strain incremental)] [２D-elastic(old）]
- Interactive MD code [FS | Carbon]
- MD code for Cabon [Brenner1]
- MD code for SiC [Tersoff]
- Polymer(polyethylene) MD code [POLY]
- Parrinello-Rahman MD code [prmd]
- Grain boundary Making program for MD [mkgb]
- Program for creating atomic coodinates [smkcryst.gb (grain boundary version）] [smkcryst (older but sound version）]
- Polynominal Approximation Program [polynominal]
- Mishin's Aluminum EAM (cubic spline ver., with strain control) [almishin ver 4.0(normal strain control)] [almishin ver.5.1(shear strain control,modified 7/11/2008)]
- Common Neighbor Analysis (CNA/TMRO)）Code (can recognize fcc,hcp or bcc structure) [honeycutt-f20]（Vup プfrom V1.0(2002)） [picture explaining CNA of bcc]
- Wien2k [quickstart Japanese translation(PDF)] [quickstart Japanese translation(MSDOC)][usage_memo]
- Xcrysdens(visualization for wien2k) [usage_memo]
- CSP(Centrosymmetry Parameter) Analysis [csp-v10]
- DPD(dissipative particle dynamics) program: basic version[dpd-ver10]
- Grain boundary making program (including diamond-structure; using Voronoi tessellatioin) [cstruct-ver09]
Links
- WIEN2000
- LAMMPS (Sandia)
- MicroAVS | VizJournal (Cybernet: former-KGT)
- DLPOLY
- GROMACS
- NAMD
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