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Do you Try interactive molecular dynamics (IMD)? Certainly, you have a fun.

Free Download
but,Copyrights all resereved memm lab. kansai univ.

#We are not responsible for any inconvenience on your computer system due to this program !!!

What does begin by pressing "s" key?

Software(Code), Links required for research activity
(K.Saitoh, updated at 2020/6/2)

Book reading (English) circle: To here!

Electronic document etc.(permission is required.)

  1. Basic concepts and programming techniques ofmolecular dynamics method(in Japanese) [PDF]
  2. Introductory Molecular Dynbamics (in Japanese) [PDF] [ppt presen(PDF)][sample programs][sample programs(fortran)]
  3. Linux in Laboratory (in Japanese) [PDF] 2015 Version
  4. Let's be with LINUX(in Japanese) [PDF]
  5. Elementary foundation of computational mechanics [PDF(in prepartion)]
  6. PovRay(Computer graphics software) teaching[PDF]
  7. Manual of atomic force microscopy(AFM) [PDF(in preparation)]
  8. Installing intel fortran, math library, structural analysis software, graph drawing software[PDF(in preparation)]
  9. Installing ab initio software [PDF(in preparation)]
  10. Various report/memorandam of Dr.K.Saitoh [lists]
  11. Example utilization of MicroAVS in research field of MD (in Japanese) [WWW]
  12. Seminar on MicroAVS in educational use [lecture video]
  13. Nano-memm computation system: Abstract [PDF]
  14. Server configuration (plan) of Nano-group [PDF]
  15. Implementation of OpenMP and Parallelization [PDF]
  16. Normalized equation for MD calculation [PDF]
  17. 3-dimensional(3-D) graph by Gnuplot [PDF]
  18. Flow of study on Computational Mechanics(in Japanese)[PDF] 2014New
  19. Concerning Nano-group server (calculation flow)[PDF] 2019up
  20. Introduction of Lammps[PDF] 2019New [Sample data] 2020New

Code of computation software (permission is required.)

  1. MD code using LJ potential [Al]
  2. MD code using EAM potential [FS | FS(Fe) | Mishin et al. | alloy | (Al)Mishin+shear]
  3. MD code using EMT potential [Cu]
  4. SPH code for solid [elastic] [plastic][elastic-plastic(strain incremental)] [2D-elastic(old)]
  5. Interactive MD code [FS | Carbon]
  6. MD code for Cabon [Brenner1]
  7. MD code for SiC [Tersoff]
  8. Polymer(polyethylene) MD code [POLY]
  9. Parrinello-Rahman MD code [prmd]
  10. Grain boundary Making program for MD [mkgb]
  11. Program for creating atomic coodinates  [smkcryst.gb (grain boundary version)] [smkcryst (older but sound version)]
  12. Polynominal Approximation Program [polynominal]
  13. Mishin's Aluminum EAM (cubic spline ver., with strain control) [almishin ver 4.0(normal strain control)] [almishin ver.5.1(shear strain control,modified 7/11/2008)]
  14. Common Neighbor Analysis (CNA/TMRO))Code (can recognize fcc,hcp or bcc structure) [honeycutt-f20](Vup プfrom V1.0(2002)) [picture explaining CNA of bcc]
  15. Wien2k [quickstart Japanese translation(PDF)] [quickstart Japanese translation(MSDOC)][usage_memo]
  16. Xcrysdens(visualization for wien2k) [usage_memo]
  17. CSP(Centrosymmetry Parameter) Analysis [csp-v10]
  18. DPD(dissipative particle dynamics) program: basic version[dpd-ver10]
  19. Grain boundary making program (including diamond-structure; using Voronoi tessellatioin) [cstruct-ver09]


  1. WIEN2000
  2. LAMMPS (Sandia)
  3. MicroAVS | VizJournal (Cybernet: former-KGT)
  6. NAMD
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Resources on lecture and practice in our department.


  • The Strength of Materials (Dept.Mech.Engng., sophomore)
  • Materials Testing (Dept.Mech.Engng., sophomore)
  • Solid Mechanics (Mechanophysics Course, junior)
  • Computer simulation (General Mech. Course, junior)
  • Mechanical Materials Science (previous:Dept.Mech.Engng., sophomore)
  • Engineering Materials (previous:Dept.Mech.System Engng., sophomore)
  • Theory of plasticity(Dept.Mech.Engng., junior)
  • Computational Strength of Materials, Advanced 1(Graduate)
  • Computational Strength of Materials, Advanced 2(Graduate)
  • Mechanical Engineering, Seminar 1,2 (Graduate, MC1)
  • Mechanical Engineering, Seminar 3,4 (Graduate, MC2)


  • Introduction on Mechanical Engineering (Experiments)
  • Introduction on Mechanical Engineering (Lecture)
  • Practice on Machine Tools and Manufacturing
  • Practice on Information Processing, A
  • General Course for Mechanical Engineering I
  • Introduction for Mechanical Engineering System
  • Introductory Experiment for Mechanical Engineering
  • Graduation Thesis (in Materials and Mechanics Laboratory)

Misc information (links)

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